Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907165.1_cds_XP_016457295.1_51035
CDS Infomation

[gene=LOC107781160] [db_xref=GeneID:107781160] [protein=BTB/POZ domain-containing protein At5g48800-like] [protein_id=XP_016457295.1] [location=complement(join(53288..53806,54121..55293,55536..55602,56613..56674))] [gbkey=CDS]
Sequence

ATGGACAAACACCATTCGCAATTGCCTCTCGCCAAGTGTTCACGGCAGCGTTATAGTGAA
TGGGTGTTTCGGGATGTTCCAAGTGATATAACGATAGAAGTAGATGGTGGCACATTTTCA
TTGCACAAGTTTCCTCTAGTCTCGAGAAGTGGGCGAATCCGGAAGCTTGTAGCAGGGCAC
AGGGATTCTGATATATCAAGGATAGAGCTACTTAGCCTACCAGGCGGAGTTGAATCATTT
GAGCTGGCAGCAAAATTCTGCTACGGCGTTAACTTTGAGATTACAGCTGCAAATGTTGCT
CAGCTTTGTTGTGTATCAGATTATCTTGAGATGACTGAGGACTATTCAAAGAACAATCTT
GGTTCCCGAGCTGAAGAATATCTTGATATTGTTGCTTGCAAGAATCTTGAAATGTGTGTT
GAAGTCCTGAAACAATGCGAAAATCTACTTCCTTTGGCTGATGAGCTGAAAATAGTTACC
CGATGCATTGATGCTATAGCATCTAAGGCTTGCGCGGAGCAAATTGCCTCAAGTTTCTCG
CGCTTGGAATACAGTAGTTCTGGTAGACTTCATATGAACCGCCAAGCCAAGTGTGAAGGA
GACTGGTGGATAGAGGATTTGTCAGTTCTTCGTATTGACTTGTATCAACGAGTCATAACA
GCGATGAAATGTCGTGGTGTTAGGCCTGAAAGTATTGCAGCATCACTAGTGAACTACGCA
CAGAAGGAGTTGACAAAGAAGTCCAGTTCCTGGAATCAATCGAGCCAACCCAAAGTTGAC
GTGGTTTCTGGTTCAAACGGCCATGAAAAGGTTGTGGTCGAAACAATTGTTAGCCTTATG
CCTGTTGAGAAATTGGTTGTTCCAATAACCTTTCTTTTTGGGTTGCTGAGAAGTGCAGTG
ATGCTTGACTGCACAGTTGCTTGTAGACTTGATCTTGAGAGGCGGATAGGATCTCAATTA
GACATAGCTACTCTCGATGATCTTCTAATTCCATTCTTTCGCAATGCTGGTGACACATTA
TTTGACGTTGACACAGTGCATAGAATCTTGGTTAATTTTTTTCAGCAGGAGGATAGTGAT
GAAGATATGGACGATGTCTCAGTGTTCGAGTCTGGTAGCCCTACTTCGCCATCCCAAACT
GCATTATTCAAAGTCGCAAAACTGGTGGACAATTACCTTGCTGAAATTGCACCTGATGCA
AACCTAAAGCTGAACAAGTTCATAGCAATTGCCGAAAGCTTACCAGCACATGCTCGTACT
GTCCATGATGGACTTTATCGATCAATCGATGTCTACCTCAAAGCTCATCAGGCGTTATCA
GATCCAGATAGGAGAAGACTATGCAAGCTGATTGATTTTCAGAAGCTCTCACAAGAAGCT
GGATCACACGCTGCACAAAACGAACGCCTCCCACTCCAATCAATCGTGCAGGTTCTATAT
TTCGAGCAACTGAGGCTTCGAAATGCCTTATTTTGTTCTTATCATGATGATGATCATAAG
CCAACGCACCAATCGTGGAGGATCAATAGTGGTGCTTTAAGTGCAGCTATGTCTCCCCGG
GATAATTATGCTTCTCTAAGACGAGAAAATAGGGAACTAAAACTTGAACTAACACGAATG
AGGATGAGATTGAATGACCTGGAGAAAGATCATGTTTGTATGAAGAAAAATATGGAAAAA
TCTAATTCCGGGGGATTCATGAGTAACTTCTCGAAAAAGATTGGCAAGTTAAACATTTTT
GGACATAGTTCTTCAAGGGAGTCATGTTCTCCTTCAAAGAGGTCACAAGTTACTGATTCT
AAGCTAACTGAAAGAACATGA

Peptide Sequence

PEP ID

XP_016457295.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein At5g48800-like [Nicotiana tabacum]
Sequence

MDKHHSQLPLAKCSRQRYSEWVFRDVPSDITIEVDGGTFSLHKFPLVSRSGRIRKLVAGH
RDSDISRIELLSLPGGVESFELAAKFCYGVNFEITAANVAQLCCVSDYLEMTEDYSKNNL
GSRAEEYLDIVACKNLEMCVEVLKQCENLLPLADELKIVTRCIDAIASKACAEQIASSFS
RLEYSSSGRLHMNRQAKCEGDWWIEDLSVLRIDLYQRVITAMKCRGVRPESIAASLVNYA
QKELTKKSSSWNQSSQPKVDVVSGSNGHEKVVVETIVSLMPVEKLVVPITFLFGLLRSAV
MLDCTVACRLDLERRIGSQLDIATLDDLLIPFFRNAGDTLFDVDTVHRILVNFFQQEDSD
EDMDDVSVFESGSPTSPSQTALFKVAKLVDNYLAEIAPDANLKLNKFIAIAESLPAHART
VHDGLYRSIDVYLKAHQALSDPDRRRLCKLIDFQKLSQEAGSHAAQNERLPLQSIVQVLY
FEQLRLRNALFCSYHDDDHKPTHQSWRINSGALSAAMSPRDNYASLRRENRELKLELTRM
RMRLNDLEKDHVCMKKNMEKSNSGGFMSNFSKKIGKLNIFGHSSSRESCSPSKRSQVTDS
KLTERT

Transcript Sequence

Gene sequence data has not been registered.